Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887585.1_cds_XP_016441980.1_37290
CDS Infomation

[gene=LOC107767484] [db_xref=GeneID:107767484] [protein=coiled-coil domain-containing protein 22-like isoform X2] [protein_id=XP_016441980.1] [location=join(49543..49803,50758..51186,51405..51469,51850..51996,52583..52807,52905..53178)] [gbkey=CDS]
Sequence

ATGGAAAAATCTCAAGAGATCCTACTCAACTCCATCGCCAACTCAGGGGTGACGATACCT
CCCGGCATCTCATCGGTCAAAAATCTCACGCCGGAAACATTATTCTTTATCTCCTCCCAG
TCATTGCACCTCATTGACCAAAATTTGTCCTTTACCTCTTCCTTGCCGGAGAACTCAGTG
TCCGACCGCTTAAAGCTCTGCTCCGACCTTGCCTCGGCCTTCAAAACCCTAGGTTTCGTC
GGTGACATCAGCTTCCACAAGTTTCTTTATCCATCGGAAGAGGACTTGTACGAGTTGGTC
CGATTCTTGGTTGGGAGGCTATCTGATGTTGAAGCTCGAAAAGATGCAGTTAGTGAATCT
AAAAGACGCCTTAAGACTCCAGAAGAAAATGTTGATGATACAGGACCACTGCCACATAAG
GAGCTTTTGGGAAGAGTGGGTGATCCATTGATGATGACACAAACACCAGAGTCGTCACAG
CGATCTTATCTTACCACGAATAAGATGGATGAGTTTTATAATGGTGTTCATATACCTGGA
GAAGGTAGAGTTGACTCCAGCGAGGAGATATCAGGCGGTGAGCAAGACGTCCTGGATTTG
GTGGAAGGCGTGAGGAGTTCTTTGAGGGAAAATGAACATGATTCTGAATATGGACTGCAA
TCAACTTCGCCGTGCGTGAATTTGCCTCAGATGAACTGCAAAACAGGAACTTTACAAGAC
CAAAAGGAAATGCTCGTGGAGAAGTCAGTCTCAGGGAATGATAAGAGAAAGGCCCTTGAG
CAGGAAAAGAGTTATCTTGAGGAAACGTTAAAAGCAGCAGAGCCAGAGAGCTATTTAAAA
TATAAAAAGTTGGAAGAGATTGAGTTGGAGCTGGAGTTTATATTAGCTGAAAAGAAAAAA
AGAGAGGAGGAACTTATTATACTCTCAGCAAAGGCCGAGAAGCGGCCCGAATTGGAACCT
AGGAGTACCTACATTCAGCGTATTGAAGAGATCACAAAAAACAGCCAGAAGCAGGATGCT
GACATAGAAAGAATCTTAAAAGAAACAAGGGAGCTTCAGTTGGAGAGCAACTCTATCCAA
GAACGGCTTAATCGAACTCATGCAGTGGTGGATGAGATGGTGTTCAGGGAGGCAAAAAAG
GACCAGGTAGGACGGCAAGCTTACAGGATACTTACTAGCATCCATGACAGCTTTGAACAA
ATAGCCGAAAATCTTCTTGCAACGGATAGAGCCCGAAGAGAAGTGGCTGATTATGAAGGC
AAGCTTGCAACTATGGCGTCTCGGACCGTTGATATTGACAAGCTGAAAGCAGACCTTGAT
ACCATCAGGAGGGAAAATGATCTTCTTGAAGCACGTCTGTCCGAGAATTTGTCCAAAGAC
TCGTCACAAAGTGTAGGGTAG

Peptide Sequence

PEP ID

XP_016441980.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein 22-like isoform X2 [Nicotiana tabacum]
Sequence

MEKSQEILLNSIANSGVTIPPGISSVKNLTPETLFFISSQSLHLIDQNLSFTSSLPENSV
SDRLKLCSDLASAFKTLGFVGDISFHKFLYPSEEDLYELVRFLVGRLSDVEARKDAVSES
KRRLKTPEENVDDTGPLPHKELLGRVGDPLMMTQTPESSQRSYLTTNKMDEFYNGVHIPG
EGRVDSSEEISGGEQDVLDLVEGVRSSLRENEHDSEYGLQSTSPCVNLPQMNCKTGTLQD
QKEMLVEKSVSGNDKRKALEQEKSYLEETLKAAEPESYLKYKKLEEIELELEFILAEKKK
REEELIILSAKAEKRPELEPRSTYIQRIEEITKNSQKQDADIERILKETRELQLESNSIQ
ERLNRTHAVVDEMVFREAKKDQVGRQAYRILTSIHDSFEQIAENLLATDRARREVADYEG
KLATMASRTVDIDKLKADLDTIRRENDLLEARLSENLSKDSSQSVG

Transcript Sequence

Gene sequence data has not been registered.